Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488124_2529 | Not Available | Negative | 2411220 - 2411468 | 8142.7 |
| sugar phosphate permease | SAMN04488124_2530 | Not Available | Positive | 2411724 - 2413058 | 45357.0 |
| signal transduction histidine kinase | SAMN04488124_2531 | Not Available | Negative | 2413071 - 2414138 | 38598.8 |
| protein of unknown function | SAMN04488124_2532 | Not Available | Negative | 2414253 - 2414675 | 14511.8 |
| protein of unknown function | SAMN04488124_2533 | Not Available | Positive | 2414799 - 2415026 | 7711.24 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN04488124_2534 | Not Available | Negative | 2415045 - 2415638 | 21282.2 |
| acetyltransferase (gnat) family protein | SAMN04488124_2535 | Not Available | Positive | 2415705 - 2416376 | 24585.2 |
| flap endonuclease 1 | SAMN04488124_2536 | Not Available | Positive | 2416404 - 2417384 | 36123.7 |
| hypothetical protein | SAMN04488124_2537 | Not Available | Positive | 2417440 - 2418783 | 50069.7 |
| 4-aminobutyrate aminotransferase | SAMN04488124_2538 | Not Available | Negative | 2418803 - 2420152 | 48963.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.