Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | SAMN04488124_2428 | Not Available | Positive | 2302924 - 2304756 | 66289.5 |
| formiminoglutamase | SAMN04488124_2429 | Not Available | Positive | 2304753 - 2305697 | 32224.3 |
| imidazolonepropionase | SAMN04488124_2430 | Not Available | Positive | 2305694 - 2306911 | 42433.6 |
| histidine ammonia-lyase | SAMN04488124_2431 | Not Available | Positive | 2306904 - 2308466 | 54521.0 |
| uncharacterized membrane protein | SAMN04488124_2432 | Not Available | Positive | 2308660 - 2309670 | 36744.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488124_2433 | Not Available | Positive | 2309735 - 2311471 | 62873.9 |
| methionyl-trna formyltransferase | SAMN04488124_2434 | Not Available | Positive | 2311481 - 2312251 | 29003.9 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN04488124_2435 | Not Available | Positive | 2312379 - 2313035 | 22271.4 |
| udp-n-acetylglucosamine 3-dehydrogenase | SAMN04488124_2436 | Not Available | Negative | 2313062 - 2314096 | 37381.3 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488124_2437 | Not Available | Negative | 2314086 - 2315213 | 40318.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.