Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | SAMN04488124_2316 | Not Available | Positive | 2201347 - 2202276 | 32920.2 |
| signal peptidase, endoplasmic reticulum-type | SAMN04488124_2317 | Not Available | Negative | 2202289 - 2202882 | 21184.0 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488124_2318 | Not Available | Positive | 2202970 - 2203389 | 15202.7 |
| miab-like trna modifying enzyme | SAMN04488124_2319 | Not Available | Negative | 2203546 - 2204799 | 46398.7 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04488124_2320 | Not Available | Positive | 2204917 - 2206146 | 43365.8 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04488124_2321 | Not Available | Positive | 2206212 - 2207408 | 42139.2 |
| deoxyribose-phosphate aldolase | SAMN04488124_2322 | Not Available | Negative | 2207418 - 2208056 | 22426.0 |
| uncharacterized membrane protein | SAMN04488124_2323 | Not Available | Positive | 2208214 - 2209032 | 27700.7 |
| ribokinase | SAMN04488124_2324 | Not Available | Positive | 2209087 - 2209950 | 30035.0 |
| hypothetical protein | SAMN04488124_2325 | Not Available | Positive | 2210007 - 2210513 | 17310.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.