Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoporphyrinogen oxidase | SAMN04488124_2114 | Not Available | Positive | 1996366 - 1997718 | 49721.7 |
| hypothetical protein | SAMN04488124_2115 | Not Available | Negative | 1997759 - 1998358 | 22496.7 |
| helix-turn-helix domain-containing protein | SAMN04488124_2116 | Not Available | Positive | 1998475 - 1999371 | 33067.6 |
| hypothetical protein | SAMN04488124_2117 | Not Available | Positive | 1999467 - 1999808 | 12109.9 |
| hypothetical protein | SAMN04488124_2118 | Not Available | Positive | 1999866 - 2000132 | 9178.52 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN04488124_2119 | Not Available | Positive | 2000243 - 2001490 | 46071.2 |
| hypothetical protein | SAMN04488124_2120 | Not Available | Positive | 2001589 - 2001825 | 8609.85 |
| hypothetical protein | SAMN04488124_2121 | Not Available | Positive | 2001910 - 2002326 | 15563.7 |
| gtp cyclohydrolase-4 | SAMN04488124_2122 | Not Available | Positive | 2002426 - 2003355 | 34146.1 |
| sugar-specific transcriptional regulator trmb | SAMN04488124_2123 | Not Available | Negative | 2003444 - 2004265 | 30218.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.