Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488124_2103 | Not Available | Positive | 1986776 - 1987702 | 34921.4 |
| hypothetical protein | SAMN04488124_2104 | Not Available | Negative | 1987931 - 1988245 | 11727.8 |
| gaf and hth_10 associated domain-containing protein | SAMN04488124_2105 | Not Available | Positive | 1988397 - 1989056 | 24751.9 |
| uncharacterized membrane protein ypja | SAMN04488124_2106 | Not Available | Negative | 1989070 - 1989822 | 27796.0 |
| pyridoxal 5'-phosphate synthase pdxs subunit | SAMN04488124_2107 | Not Available | Positive | 1990037 - 1990945 | 32789.9 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488124_2108 | Not Available | Negative | 1991006 - 1991506 | 17835.8 |
| homoserine kinase | SAMN04488124_2109 | Not Available | Negative | 1991633 - 1992508 | 29734.0 |
| putative transposase | SAMN04488124_2111 | Not Available | Positive | 1992693 - 1993073 | 14364.1 |
| putative transposase | SAMN04488124_2112 | Not Available | Positive | 1993070 - 1994344 | 49155.1 |
| signal transduction histidine kinase | SAMN04488124_2113 | Not Available | Negative | 1994392 - 1996275 | 67273.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.