Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pap2 superfamily protein | SAMN04488124_2063 | Not Available | Positive | 1947293 - 1947940 | 23287.4 |
| hypothetical protein | SAMN04488124_2064 | Not Available | Negative | 1948123 - 1948293 | 6213.77 |
| thiosulfate dehydrogenase | SAMN04488124_2065 | Not Available | Negative | 1948415 - 1948972 | 20330.8 |
| succinyl-diaminopimelate desuccinylase | SAMN04488124_2066 | Not Available | Negative | 1949042 - 1950259 | 43088.8 |
| amino acid transporter | SAMN04488124_2067 | Not Available | Negative | 1950252 - 1951652 | 48676.2 |
| predicted dna binding protein, contains hth domain | SAMN04488124_2068 | Not Available | Negative | 1951727 - 1952413 | 25602.7 |
| translation initiation factor 2 subunit beta (aeif-2b) | SAMN04488124_2069 | Not Available | Negative | 1952493 - 1953101 | 22117.6 |
| predicted oxidoreductase | SAMN04488124_2070 | Not Available | Negative | 1953173 - 1954144 | 36602.2 |
| deoxyhypusine synthase | SAMN04488124_2071 | Not Available | Negative | 1954226 - 1955326 | 40013.2 |
| sensory rhodopsin | SAMN04488124_2072 | Not Available | Negative | 1955399 - 1956094 | 24516.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.