Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | SAMN04488124_2013 | Not Available | Negative | 1904496 - 1905395 | 32161.3 |
| dtmp kinase | SAMN04488124_2014 | Not Available | Positive | 1905546 - 1906142 | 22436.9 |
| hypothetical protein | SAMN04488124_2015 | Not Available | Negative | 1906147 - 1906470 | 11664.7 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN04488124_2016 | Not Available | Positive | 1906592 - 1907638 | 39008.0 |
| hypothetical protein | SAMN04488124_2017 | Not Available | Negative | 1907644 - 1908048 | 13804.6 |
| transcriptional regulator, asnc family | SAMN04488124_2018 | Not Available | Negative | 1908116 - 1908358 | 8774.38 |
| trk system potassium uptake protein trka | SAMN04488124_2019 | Not Available | Positive | 1908441 - 1909124 | 24426.0 |
| asnc family protein | SAMN04488124_2020 | Not Available | Positive | 1909126 - 1909356 | 8224.82 |
| hypothetical protein | SAMN04488124_2021 | Not Available | Negative | 1909396 - 1909896 | 17955.4 |
| methyl-accepting chemotaxis protein | SAMN04488124_2022 | Not Available | Negative | 1910286 - 1912787 | 87478.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.