Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN04488124_1963 | Not Available | Negative | 1854193 - 1855215 | 37172.4 |
| peptide/nickel transport system permease protein | SAMN04488124_1964 | Not Available | Negative | 1855212 - 1856210 | 36392.1 |
| peptide/nickel transport system substrate-binding protein | SAMN04488124_1965 | Not Available | Negative | 1856312 - 1858012 | 62267.3 |
| trna (pseudouridine54-n1)-methyltransferase | SAMN04488124_1966 | Not Available | Positive | 1858391 - 1858987 | 21631.1 |
| Trna-pseudo | Not Available | Not Available | Positive | 1859051 - 1859123 | Not Available |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488124_1968 | Not Available | Positive | 1859520 - 1860281 | 26884.9 |
| hypothetical protein | SAMN04488124_1969 | Not Available | Positive | 1860408 - 1861133 | 26449.3 |
| lexa-binding, inner membrane-associated putative hydrolase | SAMN04488124_1970 | Not Available | Negative | 1861136 - 1862140 | 34256.9 |
| lactoylglutathione lyase | SAMN04488124_1971 | Not Available | Positive | 1862336 - 1862731 | 14576.9 |
| hypothetical protein | SAMN04488124_1972 | Not Available | Positive | 1862816 - 1864081 | 46272.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.