Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase subunit a | SAMN04488124_1953 | Not Available | Positive | 1842528 - 1844321 | 65555.6 |
| abc-2 type transport system atp-binding protein | SAMN04488124_1954 | Not Available | Positive | 1844437 - 1845462 | 37485.6 |
| abc-2 type transport system permease protein | SAMN04488124_1955 | Not Available | Positive | 1845459 - 1846226 | 28188.9 |
| short-chain dehydrogenase | SAMN04488124_1956 | Not Available | Positive | 1846293 - 1847129 | 30062.7 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN04488124_1957 | Not Available | Positive | 1847226 - 1848911 | 60229.1 |
| hypothetical protein | SAMN04488124_1958 | Not Available | Positive | 1849147 - 1850508 | 49402.6 |
| hypothetical protein | SAMN04488124_1959 | Not Available | Negative | 1850511 - 1851101 | 20676.0 |
| hypothetical protein | SAMN04488124_1960 | Not Available | Positive | 1851205 - 1851708 | 18574.7 |
| peptide/nickel transport system atp-binding protein | SAMN04488124_1961 | Not Available | Negative | 1851789 - 1853081 | 47879.9 |
| peptide/nickel transport system atp-binding protein | SAMN04488124_1962 | Not Available | Negative | 1853078 - 1854193 | 41141.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.