Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-monophosphate kinase | SAMN04488124_1813 | Not Available | Positive | 1713328 - 1714206 | 30340.7 |
| hypothetical protein | SAMN04488124_1814 | Not Available | Negative | 1714240 - 1715046 | 28295.7 |
| peptidase family m50 | SAMN04488124_1815 | Not Available | Negative | 1715142 - 1716281 | 40746.0 |
| hypothetical protein | SAMN04488124_1816 | Not Available | Negative | 1716474 - 1716734 | 9602.26 |
| molybdopterin synthase catalytic subunit | SAMN04488124_1817 | Not Available | Negative | 1717059 - 1717838 | 27659.0 |
| uridylate kinase | SAMN04488124_1818 | Not Available | Positive | 1718013 - 1718732 | 25004.4 |
| lysyl-trna synthetase, class i | SAMN04488124_1819 | Not Available | Positive | 1718733 - 1720412 | 62796.4 |
| uncharacterized protein yxji | SAMN04488124_1820 | Not Available | Negative | 1720429 - 1720965 | 20259.9 |
| hypothetical protein | SAMN04488124_1821 | Not Available | Positive | 1721123 - 1721389 | 9523.81 |
| pdz domain-containing protein | SAMN04488124_1822 | Not Available | Positive | 1721442 - 1723256 | 62725.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.