Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN04488124_1733 | Not Available | Negative | 1638953 - 1641802 | 105315.0 |
| hypothetical protein | SAMN04488124_1734 | Not Available | Negative | 1641949 - 1642086 | 4828.0 |
| endoglucanase acf2 | SAMN04488124_1735 | Not Available | Negative | 1642136 - 1644598 | 89541.9 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN04488124_1736 | Not Available | Positive | 1644781 - 1645464 | 25377.3 |
| hypothetical protein | SAMN04488124_1737 | Not Available | Negative | 1645472 - 1645951 | 17921.1 |
| hypothetical protein | SAMN04488124_1738 | Not Available | Positive | 1646075 - 1646923 | 31214.3 |
| plastocyanin | SAMN04488124_1739 | Not Available | Positive | 1646993 - 1647655 | 21919.1 |
| hypothetical protein | SAMN04488124_1740 | Not Available | Positive | 1647655 - 1648041 | 14550.7 |
| cytochrome b(n-terminal)/b6/petb | SAMN04488124_1741 | Not Available | Positive | 1648044 - 1648838 | 30576.6 |
| cytochrome b(c-terminal)/b6/petd | SAMN04488124_1742 | Not Available | Positive | 1648843 - 1649604 | 28513.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.