Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488124_1713 | Not Available | Positive | 1618568 - 1619626 | 37415.6 |
| methyltransferase, fkbm family | SAMN04488124_1714 | Not Available | Negative | 1619614 - 1620393 | 28234.8 |
| lipid kinase, yegs/rv2252/bmru family | SAMN04488124_1715 | Not Available | Negative | 1620480 - 1621445 | 34164.9 |
| amino acid transporter | SAMN04488124_1716 | Not Available | Positive | 1621575 - 1622912 | 46583.4 |
| Trna-gln | Not Available | Not Available | Positive | 1623102 - 1623174 | Not Available |
| hypothetical protein | SAMN04488124_1718 | Not Available | Negative | 1623364 - 1623567 | 7088.2 |
| iron (metal) dependent repressor, dtxr family | SAMN04488124_1719 | Not Available | Negative | 1623678 - 1624121 | 16335.0 |
| rubrerythrin | SAMN04488124_1720 | Not Available | Negative | 1624150 - 1624689 | 20300.2 |
| iron-regulated abc transporter permease protein sufd | SAMN04488124_1721 | Not Available | Negative | 1624841 - 1626052 | 45331.8 |
| fe-s cluster assembly protein sufb | SAMN04488124_1722 | Not Available | Negative | 1626054 - 1627484 | 53232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.