Halogeometricum limi

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum limi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halogeometricum limi strain CGMCC 1.8711 genome assembly, contig:

Gene Summary

Adenine Count

613622 bp

Thymine Count

621246 bp

Guanine Count

1187391 bp

Cytosine Count

1193980 bp

Genome Length

3616269 bp

Protein-coding Genes

3607 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyl-coa synthetaseSAMN04488124_1683Not AvailableNegative1584843 - 158682273599.3
methylmalonyl-coa mutase, n-terminal domainSAMN04488124_1684Not AvailableNegative1586954 - 158865462995.1
outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeatSAMN04488124_1685Not AvailableNegative1588711 - 159008449522.7
ferredoxin-nadp reductaseSAMN04488124_1686Not AvailableNegative1590125 - 159076321838.8
2-oxoglutarate ferredoxin oxidoreductase subunit alphaSAMN04488124_1687Not AvailablePositive1591008 - 159275363708.4
2-oxoglutarate ferredoxin oxidoreductase subunit betaSAMN04488124_1688Not AvailablePositive1592757 - 159362031241.1
hypothetical proteinSAMN04488124_1689Not AvailableNegative1593709 - 159407413014.3
sugar-specific transcriptional regulator trmbSAMN04488124_1690Not AvailablePositive1594251 - 159506329347.1
hypothetical proteinSAMN04488124_1691Not AvailableNegative1595135 - 159577921780.8
hypothetical proteinSAMN04488124_1692Not AvailableNegative1595865 - 15960627352.44

Displaying genes 1681 – 1690 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.