Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pgf-cterm protein | SAMN04488124_1633 | Not Available | Negative | 1539930 - 1540466 | 18474.2 |
| acetylornithine deacetylase | SAMN04488124_1634 | Not Available | Negative | 1540614 - 1541720 | 38385.4 |
| diaminopimelate epimerase | SAMN04488124_1635 | Not Available | Negative | 1541721 - 1542587 | 30005.8 |
| diaminopimelate decarboxylase | SAMN04488124_1636 | Not Available | Negative | 1542584 - 1543843 | 44987.4 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN04488124_1637 | Not Available | Negative | 1543840 - 1544685 | 30441.5 |
| dihydrodipicolinate reductase | SAMN04488124_1638 | Not Available | Negative | 1544682 - 1545452 | 26886.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488124_1639 | Not Available | Negative | 1545453 - 1546379 | 33000.5 |
| uncharacterized conserved protein, laba/duf88 family | SAMN04488124_1640 | Not Available | Positive | 1546674 - 1547171 | 18322.4 |
| hypothetical protein | SAMN04488124_1641 | Not Available | Negative | 1547177 - 1548067 | 30855.9 |
| hypothetical protein | SAMN04488124_1642 | Not Available | Negative | 1548128 - 1548307 | 5987.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.