Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yfca | SAMN04488124_0147 | Not Available | Positive | 148088 - 149176 | 38069.4 |
| hypothetical protein | SAMN04488124_0148 | Not Available | Negative | 149283 - 149444 | 6229.38 |
| spfh domain, band 7 family protein | SAMN04488124_0149 | Not Available | Negative | 149522 - 150655 | 41561.1 |
| hypothetical protein | SAMN04488124_0150 | Not Available | Positive | 150753 - 150950 | 7080.28 |
| 2'-5' rna ligase superfamily protein | SAMN04488124_0151 | Not Available | Positive | 151007 - 151519 | 19371.9 |
| cytochrome p450 | SAMN04488124_0152 | Not Available | Negative | 151579 - 152937 | 51669.4 |
| dna excision repair protein ercc-2 | SAMN04488124_0153 | Not Available | Negative | 153022 - 155199 | 82165.2 |
| small-conductance mechanosensitive channel | SAMN04488124_0154 | Not Available | Positive | 155316 - 156248 | 33901.4 |
| hypothetical protein | SAMN04488124_0155 | Not Available | Positive | 156339 - 156848 | 17020.9 |
| hypothetical protein | SAMN04488124_0156 | Not Available | Positive | 157004 - 157468 | 15341.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.