Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04488124_1583 | Not Available | Negative | 1488462 - 1489436 | 36120.5 |
| trk system potassium uptake protein trkh | SAMN04488124_1584 | Not Available | Positive | 1489653 - 1491197 | 55254.8 |
| trk system potassium uptake protein trka | SAMN04488124_1585 | Not Available | Negative | 1491261 - 1492598 | 47546.6 |
| trk system potassium uptake protein trkh | SAMN04488124_1586 | Not Available | Negative | 1492733 - 1494337 | 57108.1 |
| trk system potassium uptake protein trka | SAMN04488124_1587 | Not Available | Negative | 1494396 - 1495733 | 48007.4 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04488124_1588 | Not Available | Negative | 1495806 - 1496339 | 20881.4 |
| hypothetical protein | SAMN04488124_1589 | Not Available | Positive | 1496438 - 1497331 | 32056.2 |
| pyridine nucleotide-disulphide oxidoreductase | SAMN04488124_1590 | Not Available | Positive | 1497437 - 1498213 | 28301.4 |
| pqq-like domain-containing protein | SAMN04488124_1591 | Not Available | Negative | 1498227 - 1499465 | 43639.2 |
| phosphopantothenate-cysteine ligase | SAMN04488124_1592 | Not Available | Positive | 1499554 - 1500708 | 40268.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.