Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gas vesicle protein | SAMN04488124_1542 | Not Available | Positive | 1450929 - 1451399 | 16063.8 |
| gas vesicle protein k | SAMN04488124_1543 | Not Available | Positive | 1451396 - 1451743 | 12460.4 |
| gas vesicle synthesis protein gvpl/gvpf | SAMN04488124_1544 | Not Available | Positive | 1451736 - 1452593 | 31265.2 |
| gas vesicle protein | SAMN04488124_1545 | Not Available | Positive | 1452571 - 1452831 | 9277.92 |
| hypothetical protein | SAMN04488124_1546 | Not Available | Positive | 1452862 - 1453833 | 36586.4 |
| fad/fmn-containing dehydrogenase | SAMN04488124_1547 | Not Available | Negative | 1453906 - 1455291 | 50882.3 |
| hypothetical protein | SAMN04488124_1548 | Not Available | Negative | 1455480 - 1456100 | 22945.8 |
| Trna-gly | Not Available | Not Available | Positive | 1456283 - 1456353 | Not Available |
| thioredoxin reductase (nadph) | SAMN04488124_1550 | Not Available | Negative | 1456611 - 1457675 | 38564.3 |
| methyltransferase domain-containing protein | SAMN04488124_1551 | Not Available | Negative | 1457767 - 1458477 | 25665.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.