Halogeometricum limi

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum limi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halogeometricum limi strain CGMCC 1.8711 genome assembly, contig:

Gene Summary

Adenine Count

613622 bp

Thymine Count

621246 bp

Guanine Count

1187391 bp

Cytosine Count

1193980 bp

Genome Length

3616269 bp

Protein-coding Genes

3607 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbonic anhydraseSAMN04488124_1501Not AvailablePositive1413710 - 141435422671.3
hypothetical proteinSAMN04488124_1502Not AvailableNegative1414428 - 141685487919.8
nad(p)h-quinone oxidoreductase subunit 5SAMN04488124_1503Not AvailableNegative1416847 - 141832851918.0
dna-binding transcriptional regulator, lrp familySAMN04488124_1504Not AvailableNegative1418613 - 141908916977.9
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN04488124_1505Not AvailableNegative1419153 - 141978221511.2
serine protease, s1-c subfamily, contains c-terminal pdz domainSAMN04488124_1506Not AvailablePositive1419984 - 142106638044.7
hypothetical proteinSAMN04488124_1507Not AvailablePositive1421107 - 142145112211.5
abc-2 type transport system permease proteinSAMN04488124_1508Not AvailableNegative1421477 - 142223226896.4
abc-2 type transport system atp-binding proteinSAMN04488124_1509Not AvailableNegative1422229 - 142320634201.7
glucose/arabinose dehydrogenase, beta-propeller foldSAMN04488124_1510Not AvailablePositive1423339 - 142472448881.4

Displaying genes 1501 – 1510 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.