Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted purr-regulated permease perm | SAMN04488124_0137 | Not Available | Positive | 137861 - 138862 | 35312.1 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04488124_0138 | Not Available | Negative | 138893 - 139726 | 31066.2 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04488124_0139 | Not Available | Positive | 139968 - 140828 | 32090.1 |
| hypothetical protein | SAMN04488124_0140 | Not Available | Positive | 140936 - 141358 | 15397.3 |
| uncharacterized membrane protein spoiim, required for sporulation | SAMN04488124_0141 | Not Available | Negative | 141441 - 142979 | 51135.3 |
| hypothetical protein | SAMN04488124_0142 | Not Available | Positive | 143057 - 143674 | 22194.2 |
| hypothetical protein | SAMN04488124_0143 | Not Available | Negative | 144048 - 144320 | 9726.1 |
| excinuclease abc subunit b | SAMN04488124_0144 | Not Available | Positive | 144453 - 146555 | 79801.1 |
| protein of unknown function | SAMN04488124_0145 | Not Available | Negative | 146686 - 147294 | 21219.2 |
| 8-oxo-dgtp diphosphatase | SAMN04488124_0146 | Not Available | Positive | 147442 - 147825 | 14651.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.