Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN04488124_1471 | Not Available | Negative | 1383647 - 1384294 | 22859.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN04488124_1472 | Not Available | Negative | 1384314 - 1385477 | 41591.6 |
| tigr03663 family protein | SAMN04488124_1473 | Not Available | Negative | 1385568 - 1387439 | 67247.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN04488124_1474 | Not Available | Positive | 1387550 - 1387954 | 13862.2 |
| aspartate aminotransferase | SAMN04488124_1475 | Not Available | Positive | 1387951 - 1389099 | 41263.6 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04488124_1476 | Not Available | Negative | 1389153 - 1389668 | 18723.7 |
| hypothetical protein | SAMN04488124_1477 | Not Available | Negative | 1389741 - 1391102 | 46240.8 |
| putative abc transport system permease protein | SAMN04488124_1478 | Not Available | Negative | 1391099 - 1392244 | 40880.9 |
| putative abc transport system atp-binding protein | SAMN04488124_1479 | Not Available | Negative | 1392241 - 1392963 | 26327.0 |
| hypothetical protein | SAMN04488124_1480 | Not Available | Negative | 1392969 - 1394405 | 49970.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.