Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transporter, zip family | SAMN04488124_1441 | Not Available | Negative | 1356200 - 1357042 | 29336.6 |
| conserved tm helix | SAMN04488124_1442 | Not Available | Negative | 1357193 - 1357954 | 26554.5 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04488124_1443 | Not Available | Positive | 1358182 - 1358511 | 11640.2 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN04488124_1444 | Not Available | Positive | 1358547 - 1359026 | 16835.5 |
| putative, 10tm heavy-metal exporter | SAMN04488124_1445 | Not Available | Positive | 1359132 - 1360352 | 41872.0 |
| hypothetical protein | SAMN04488124_1446 | Not Available | Positive | 1360395 - 1360685 | 10685.0 |
| acetyltransferase | SAMN04488124_1447 | Not Available | Positive | 1360833 - 1362926 | 74106.4 |
| hypothetical protein | SAMN04488124_1448 | Not Available | Positive | 1362930 - 1364027 | 38776.5 |
| hypothetical protein | SAMN04488124_1449 | Not Available | Negative | 1364038 - 1364223 | 6298.73 |
| xaa-pro aminopeptidase | SAMN04488124_1450 | Not Available | Negative | 1364292 - 1365407 | 40001.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.