Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN04488124_1351 | Not Available | Positive | 1278706 - 1279140 | 15634.4 |
| rio1 family protein | SAMN04488124_1352 | Not Available | Positive | 1279203 - 1280000 | 29808.2 |
| alpha/beta hydrolase family protein | SAMN04488124_1353 | Not Available | Positive | 1280037 - 1281239 | 43713.0 |
| protein of unknown function | SAMN04488124_1354 | Not Available | Negative | 1281264 - 1281629 | 12605.4 |
| plastocyanin | SAMN04488124_1355 | Not Available | Negative | 1281716 - 1282294 | 20370.1 |
| branched-chain amino acid transport system atp-binding protein | SAMN04488124_1356 | Not Available | Negative | 1282358 - 1283137 | 27469.2 |
| branched-chain amino acid transport system atp-binding protein | SAMN04488124_1357 | Not Available | Negative | 1283134 - 1283970 | 30388.1 |
| branched-chain amino acid transport system permease protein | SAMN04488124_1358 | Not Available | Negative | 1283967 - 1285052 | 38565.8 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN04488124_1359 | Not Available | Negative | 1285049 - 1285996 | 32821.4 |
| branched-chain amino acid transport system substrate-binding protein | SAMN04488124_1360 | Not Available | Negative | 1286045 - 1287382 | 46319.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.