Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase, n-terminal domain | SAMN04488124_1160 | Not Available | Positive | 1095567 - 1097243 | 61997.8 |
| hypothetical protein | SAMN04488124_1161 | Not Available | Positive | 1097516 - 1097839 | 10931.0 |
| hypothetical protein | SAMN04488124_1162 | Not Available | Positive | 1097897 - 1098388 | 17161.5 |
| methylmalonyl-coa epimerase | SAMN04488124_1163 | Not Available | Positive | 1098447 - 1098830 | 13639.8 |
| hypothetical protein | SAMN04488124_1164 | Not Available | Positive | 1098886 - 1099080 | 7097.82 |
| o-succinylbenzoic acid--coa ligase | SAMN04488124_1165 | Not Available | Positive | 1099132 - 1100883 | 61690.2 |
| fatty-acyl-coa synthase | SAMN04488124_1166 | Not Available | Positive | 1100972 - 1102633 | 61402.4 |
| acyl-coa dehydrogenase | SAMN04488124_1167 | Not Available | Positive | 1102724 - 1103872 | 42729.8 |
| hemolysin, contains cbs domains | SAMN04488124_1168 | Not Available | Positive | 1104021 - 1105079 | 38500.0 |
| predicted arabinose efflux permease, mfs family | SAMN04488124_1169 | Not Available | Negative | 1105104 - 1106345 | 42147.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.