Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase (nad+) | SAMN04488124_0087 | Not Available | Positive | 84046 - 86151 | 77083.9 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04488124_0088 | Not Available | Positive | 86165 - 86638 | 18115.6 |
| abc-2 type transport system permease protein | SAMN04488124_0089 | Not Available | Negative | 86690 - 87610 | 32615.2 |
| abc-2 type transport system atp-binding protein | SAMN04488124_0090 | Not Available | Negative | 87607 - 88668 | 37264.0 |
| hypothetical protein | SAMN04488124_0091 | Not Available | Negative | 88757 - 88972 | 8200.4 |
| hypothetical protein | SAMN04488124_0092 | Not Available | Positive | 89151 - 89573 | 15907.5 |
| excinuclease abc subunit c | SAMN04488124_0093 | Not Available | Positive | 89674 - 91416 | 63989.0 |
| hypothetical protein | SAMN04488124_0094 | Not Available | Negative | 91447 - 91809 | 13368.8 |
| zinc transporter, zip family | SAMN04488124_0095 | Not Available | Positive | 92113 - 92796 | 22690.2 |
| malate dehydrogenase (nad) | SAMN04488124_0096 | Not Available | Negative | 92861 - 93775 | 32896.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.