Streptomyces sedi str. JCM 16909

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sedi strain JCM 16909 is a rod-shaped bacterium recognized for its ability to form spores, a characteristic that plays a crucial role in its survival and dissemination in various environments. This actinobacterial strain thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions, which may reflect its adaptation to specific ecological niches. Streptomyces species are well-known for their complex life cycles and their ability to produce a diverse array of bioactive secondary metabolites, although specific metabolic capabilities of JCM 16909 remain to be elucidated. The spore-forming capacity of this strain suggests a potential for resilience against unfavorable conditions, allowing it to endure periods of desiccation or nutrient scarcity. The ecological implications of Streptomyces sedi str. JCM 16909 may be significant, particularly in soil ecosystems where it can contribute to the decomposition of organic matter and the cycling of nutrients. Its ability to form spores not only aids in survival but also facilitates its role in soil health and fertility, potentially influencing microbial community dynamics and interactions with other soil organisms. Further research may uncover the specific ecological roles and biotechnological applications of this strain, particularly in relation to its secondary metabolite production.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sedi
StrainJCM 16909

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sedi str. JCM 16909
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sedi strain JCM 16909

Gene Summary

Adenine Count

888013 bp

Thymine Count

899807 bp

Guanine Count

2418533 bp

Cytosine Count

2397444 bp

Genome Length

6603797 bp

Protein-coding Genes

5374 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fmn-dependent nadh-azoreductaseFH715_13330Not AvailableNegative3227748 - 322838622590.5
helix-turn-helix transcriptional regulatorFH715_13335Not AvailablePositive3228501 - 322889313994.8
j domain-containing proteinFH715_13340Not AvailablePositive3228974 - 322993634626.7
rhodanese-like domain-containing proteinFH715_13345Not AvailablePositive3229968 - 323030611784.1
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeFH715_13350Not AvailableNegative3230443 - 323159440711.5
rna methyltransferaseFH715_13365Not AvailablePositive3234038 - 323478125676.0
duf4232 domain-containing proteinFH715_13370Not AvailableNegative3234903 - 323567626670.8
helix-turn-helix domain-containing proteinFH715_13375Not AvailablePositive3235807 - 323701542579.6
had family hydrolaseFH715_13380Not AvailableNegative3237516 - 323820225350.2
hypothetical proteinFH715_13385Not AvailablePositive3238609 - 32388218026.51

Displaying genes 2591 – 2600 of 5433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.