Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 4539 - 4651 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 4543 - 4655 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 4766 - 4862 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 4811 - 5135 | 18.01 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN05192549_1017 | Not Available | Negative | 3776 - 4837 | 38050.0 |
| dna-binding transcriptional regulator, acrr family | SAMN05192549_1018 | Not Available | Negative | 4884 - 5510 | 22989.5 |
| predicted o-methyltransferase yrrm | SAMN05192549_1019 | Not Available | Positive | 5637 - 6302 | 24316.2 |
| predicted arabinose efflux permease, mfs family | SAMN05192549_10110 | Not Available | Positive | 6310 - 7509 | 40222.1 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN05192549_10111 | Not Available | Positive | 7502 - 8239 | 26240.5 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 8214 - 8296 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
