Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ycfj, contains glycine zipper 2tm domain | SAMN05192549_11162 | Not Available | Positive | 5066872 - 5067387 | 18369.7 |
| spermidine synthase | SAMN05192549_11163 | Not Available | Positive | 5067483 - 5068289 | 29906.3 |
| general secretion pathway protein e | SAMN05192549_11164 | Not Available | Positive | 5068315 - 5070117 | 66340.5 |
| Trna-lys | Not Available | Not Available | Positive | 5070169 - 5070244 | Not Available |
| mfs transporter, fhs family, l-fucose permease | SAMN05192549_11166 | Not Available | Negative | 5070287 - 5071588 | 45769.7 |
| alpha-1,2-mannosidase, putative | SAMN05192549_11167 | Not Available | Negative | 5071640 - 5074066 | 88602.6 |
| dna-binding transcriptional regulator, laci/purr family | SAMN05192549_11168 | Not Available | Negative | 5074181 - 5075164 | 35725.2 |
| beta-mannosidase | SAMN05192549_11169 | Not Available | Negative | 5075238 - 5077916 | 98771.3 |
| tryptophan halogenase | SAMN05192549_11170 | Not Available | Negative | 5077913 - 5079433 | 56818.7 |
| tonb-dependent receptor | SAMN05192549_11171 | Not Available | Negative | 5079495 - 5082587 | 112832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
