Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding module (family 6) | SAMN05192549_110127 | Not Available | Negative | 4916664 - 4918745 | 75936.6 |
| thymidine kinase | SAMN05192549_110128 | Not Available | Negative | 4918904 - 4919434 | 19643.4 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN05192549_110129 | Not Available | Negative | 4919511 - 4921136 | 60973.8 |
| cystathionine beta-synthase | SAMN05192549_110130 | Not Available | Positive | 4921240 - 4922607 | 49392.2 |
| cystathionine gamma-lyase | SAMN05192549_110131 | Not Available | Positive | 4922604 - 4923776 | 42272.8 |
| hnh endonuclease | SAMN05192549_110132 | Not Available | Positive | 4923794 - 4924180 | 14212.4 |
| acyl-homoserine-lactone acylase | SAMN05192549_110133 | Not Available | Negative | 4924193 - 4926412 | 82931.0 |
| hypothetical protein | SAMN05192549_110134 | Not Available | Negative | 4926435 - 4927277 | 30662.6 |
| pep-cterm protein-sorting domain-containing protein | SAMN05192549_110135 | Not Available | Positive | 4927593 - 4928273 | 23552.6 |
| hypothetical protein | SAMN05192549_110136 | Not Available | Positive | 4928353 - 4928643 | 10732.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
