Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05192549_11087 | Not Available | Positive | 4862885 - 4863628 | 27291.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN05192549_11088 | Not Available | Positive | 4863671 - 4864234 | 19621.2 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN05192549_11089 | Not Available | Positive | 4864302 - 4865369 | 39662.3 |
| pas domain s-box-containing protein | SAMN05192549_11090 | Not Available | Positive | 4865475 - 4870022 | 162953.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05192549_11091 | Not Available | Positive | 4870019 - 4870942 | 33921.5 |
| lysr substrate binding domain-containing protein | SAMN05192549_11092 | Not Available | Positive | 4871020 - 4871454 | 15635.9 |
| protein of unknown function | SAMN05192549_11093 | Not Available | Positive | 4871615 - 4871824 | 7198.97 |
| acyl-coa dehydrogenase | SAMN05192549_11094 | Not Available | Negative | 4871842 - 4872978 | 41145.4 |
| acyl-coa dehydrogenase | SAMN05192549_11095 | Not Available | Negative | 4872989 - 4874179 | 44350.2 |
| predicted arabinose efflux permease, mfs family | SAMN05192549_11096 | Not Available | Positive | 4874384 - 4875589 | 41398.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
