Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretory pathway, component exea (predicted atpase) | SAMN05192549_11077 | Not Available | Positive | 4851323 - 4852234 | 33160.5 |
| general secretion pathway protein d | SAMN05192549_11078 | Not Available | Positive | 4852311 - 4854170 | 65742.4 |
| uncharacterized conserved protein hemy, contains two tpr repeats | SAMN05192549_11079 | Not Available | Positive | 4854167 - 4855765 | 54323.2 |
| general secretion pathway protein e/type iv pilus assembly protein pilb | SAMN05192549_11080 | Not Available | Positive | 4855771 - 4857474 | 62511.8 |
| type iv pilus assembly protein pilc | SAMN05192549_11081 | Not Available | Positive | 4857474 - 4858676 | 44650.3 |
| hypothetical protein | SAMN05192549_11082 | Not Available | Positive | 4858684 - 4860255 | 58296.7 |
| hypothetical protein | SAMN05192549_11083 | Not Available | Positive | 4860252 - 4860941 | 25529.8 |
| hypothetical protein | SAMN05192549_11084 | Not Available | Positive | 4860938 - 4861417 | 16398.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN05192549_11085 | Not Available | Positive | 4861407 - 4862120 | 25515.6 |
| hypothetical protein | SAMN05192549_11086 | Not Available | Positive | 4862117 - 4862881 | 26800.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
