Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triacylglycerol lipase | SAMN05192549_1107 | Not Available | Positive | 4772231 - 4773145 | 31963.0 |
| lipase chaperone limk | SAMN05192549_1108 | Not Available | Positive | 4773145 - 4774074 | 33816.8 |
| hypothetical protein | SAMN05192549_1109 | Not Available | Negative | 4774075 - 4774500 | 16241.3 |
| methyl-accepting chemotaxis protein | SAMN05192549_11010 | Not Available | Negative | 4774640 - 4776385 | 61465.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05192549_11011 | Not Available | Negative | 4776511 - 4777656 | 41159.5 |
| 5'-nucleotidase | SAMN05192549_11012 | Not Available | Positive | 4777791 - 4778726 | 34827.4 |
| transcription-repair coupling factor | SAMN05192549_11013 | Not Available | Positive | 4778765 - 4782217 | 127820.0 |
| phosphoserine phosphatase | SAMN05192549_11014 | Not Available | Positive | 4782285 - 4783127 | 30391.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05192549_11015 | Not Available | Negative | 4783134 - 4784099 | 35254.8 |
| protein tyrosine phosphatase | SAMN05192549_11016 | Not Available | Negative | 4784141 - 4784626 | 17555.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
