Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05192549_109251 | Not Available | Positive | 4760494 - 4761255 | 26752.5 |
| dna-binding transcriptional regulator, marr family | SAMN05192549_109252 | Not Available | Negative | 4761252 - 4761683 | 15762.7 |
| predicted alpha/beta hydrolase | SAMN05192549_109253 | Not Available | Negative | 4761680 - 4762531 | 30850.4 |
| transposase | SAMN05192549_109254 | Not Available | Negative | 4762743 - 4763461 | 28059.3 |
| hypothetical protein | SAMN05192549_1101 | Not Available | Negative | 4763794 - 4764024 | 8781.62 |
| hypothetical protein | SAMN05192549_1102 | Not Available | Negative | 4764187 - 4765557 | 50906.7 |
| proton-dependent oligopeptide transporter, pot family | SAMN05192549_1103 | Not Available | Positive | 4765782 - 4767287 | 54290.6 |
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | SAMN05192549_1104 | Not Available | Negative | 4767328 - 4768860 | 56733.8 |
| penicillin-binding protein 1a | SAMN05192549_1105 | Not Available | Positive | 4768966 - 4771362 | 86889.0 |
| dna-binding transcriptional regulator, acrr family | SAMN05192549_1106 | Not Available | Negative | 4771370 - 4772050 | 25675.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
