Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc protease | SAMN05192549_109201 | Not Available | Negative | 4714365 - 4717112 | 100333.0 |
| protein of unknown function | SAMN05192549_109202 | Not Available | Negative | 4717202 - 4717531 | 12009.3 |
| adenosylcobinamide-phosphate synthase | SAMN05192549_109203 | Not Available | Negative | 4717757 - 4718722 | 36149.2 |
| nudix domain-containing protein | SAMN05192549_109204 | Not Available | Negative | 4718776 - 4719444 | 24474.2 |
| lsu ribosomal protein l19p | SAMN05192549_109205 | Not Available | Negative | 4719531 - 4719914 | 14349.4 |
| trna (guanine37-n1)-methyltransferase | SAMN05192549_109206 | Not Available | Negative | 4720001 - 4720747 | 27603.4 |
| 16s rrna processing protein rimm | SAMN05192549_109207 | Not Available | Negative | 4720774 - 4721337 | 20447.5 |
| ssu ribosomal protein s16p | SAMN05192549_109208 | Not Available | Negative | 4721356 - 4721604 | 9165.17 |
| tm2 domain-containing protein | SAMN05192549_109209 | Not Available | Positive | 4721827 - 4722255 | 15246.8 |
| glycine zipper 2tm domain-containing protein | SAMN05192549_109210 | Not Available | Positive | 4722271 - 4722864 | 20747.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
