Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol abc transporter atp-binding protein /mannitol abc transporter atp-binding protein | SAMN05192549_109191 | Not Available | Positive | 4701784 - 4702893 | 39601.2 |
| hypothetical protein | SAMN05192549_109192 | Not Available | Positive | 4702967 - 4704271 | 47771.3 |
| chitinase | SAMN05192549_109193 | Not Available | Negative | 4704302 - 4705522 | 44628.7 |
| transcriptional regulator, gntr family | SAMN05192549_109194 | Not Available | Negative | 4705512 - 4706252 | 27757.6 |
| iron complex outermembrane recepter protein | SAMN05192549_109195 | Not Available | Positive | 4706637 - 4709384 | 98109.9 |
| tryptophan halogenase | SAMN05192549_109196 | Not Available | Positive | 4709452 - 4710972 | 56472.8 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05192549_109197 | Not Available | Negative | 4711032 - 4711886 | 29882.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05192549_109198 | Not Available | Positive | 4711982 - 4712914 | 33650.8 |
| thioredoxin reductase | SAMN05192549_109199 | Not Available | Negative | 4712928 - 4713854 | 32710.2 |
| dna-binding transcriptional regulator, iscr family | SAMN05192549_109200 | Not Available | Negative | 4713829 - 4714293 | 16805.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
