Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-regulated fad-dependent pyridine nucleotide-disulphide oxidoreductase | SAMN05192549_109111 | Not Available | Positive | 4625467 - 4627236 | 62902.5 |
| hypothetical protein | SAMN05192549_109112 | Not Available | Negative | 4627239 - 4628558 | 48628.2 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05192549_109113 | Not Available | Negative | 4628559 - 4629476 | 33831.2 |
| beta-lactamase superfamily domain-containing protein | SAMN05192549_109114 | Not Available | Negative | 4629473 - 4630783 | 49068.7 |
| peptidase family m28 | SAMN05192549_109115 | Not Available | Negative | 4630783 - 4632132 | 49341.3 |
| competence protein comea | SAMN05192549_109116 | Not Available | Negative | 4632195 - 4632491 | 10407.7 |
| protein of unknown function | SAMN05192549_109117 | Not Available | Negative | 4632604 - 4633851 | 42646.4 |
| rfae bifunctional protein, domain i | SAMN05192549_109118 | Not Available | Negative | 4634037 - 4634957 | 32852.4 |
| udp-glucose dehydrogenase | SAMN05192549_109119 | Not Available | Negative | 4634972 - 4636339 | 49458.3 |
| lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domain | SAMN05192549_109120 | Not Available | Negative | 4636351 - 4637526 | 44541.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
