Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05192549_10991 | Not Available | Positive | 4603115 - 4604053 | 34658.5 |
| predicted ester cyclase | SAMN05192549_10992 | Not Available | Negative | 4604046 - 4604495 | 16064.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05192549_10993 | Not Available | Negative | 4604596 - 4605342 | 25835.9 |
| hypothetical protein | SAMN05192549_10994 | Not Available | Negative | 4605339 - 4605671 | 13048.8 |
| thiol:disulfide interchange protein dsba | SAMN05192549_10995 | Not Available | Negative | 4605694 - 4606350 | 24224.2 |
| iron complex transport system substrate-binding protein | SAMN05192549_10996 | Not Available | Negative | 4606435 - 4607307 | 31513.1 |
| iron complex outermembrane recepter protein | SAMN05192549_10997 | Not Available | Negative | 4607307 - 4609322 | 73606.7 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN05192549_10998 | Not Available | Positive | 4609582 - 4610391 | 29269.1 |
| ribosome biogenesis gtpase a | SAMN05192549_10999 | Not Available | Negative | 4610392 - 4611342 | 34603.1 |
| putative oligopeptide transporter, opt family | SAMN05192549_109100 | Not Available | Positive | 4611473 - 4613458 | 66870.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
