Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease-8 | SAMN05192549_108260 | Not Available | Negative | 4466076 - 4466879 | 30206.6 |
| zn-dependent protease (includes spoivfb) | SAMN05192549_108261 | Not Available | Negative | 4466941 - 4467654 | 25899.3 |
| uncharacterized membrane-anchored protein | SAMN05192549_108262 | Not Available | Negative | 4467659 - 4468579 | 33226.1 |
| imidazolonepropionase | SAMN05192549_108263 | Not Available | Positive | 4468701 - 4470164 | 52432.9 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN05192549_108264 | Not Available | Positive | 4470197 - 4471855 | 60085.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05192549_108265 | Not Available | Negative | 4471877 - 4473712 | 67816.6 |
| transcriptional regulator, marr family | SAMN05192549_108266 | Not Available | Positive | 4473862 - 4474311 | 16379.9 |
| uncharacterized membrane protein yccc | SAMN05192549_108267 | Not Available | Positive | 4474308 - 4476347 | 72459.6 |
| protein of unknown function | SAMN05192549_108268 | Not Available | Positive | 4476344 - 4476550 | 7813.1 |
| rnd family efflux transporter, mfp subunit | SAMN05192549_108269 | Not Available | Positive | 4476553 - 4477431 | 31891.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
