Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| psif repeat-containing protein | SAMN05192549_108220 | Not Available | Negative | 4420281 - 4420568 | 10267.6 |
| superoxide dismutase, cu-zn family | SAMN05192549_108221 | Not Available | Positive | 4420710 - 4421240 | 17743.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05192549_108222 | Not Available | Negative | 4421248 - 4421988 | 26094.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05192549_108223 | Not Available | Positive | 4422094 - 4422987 | 32885.5 |
| hypothetical protein | SAMN05192549_108224 | Not Available | Positive | 4423118 - 4423657 | 20353.3 |
| tryptophan halogenase | SAMN05192549_108225 | Not Available | Negative | 4423654 - 4425168 | 57005.9 |
| cupin-like domain-containing protein | SAMN05192549_108226 | Not Available | Negative | 4425180 - 4426184 | 37075.1 |
| sapc protein | SAMN05192549_108227 | Not Available | Negative | 4426177 - 4426881 | 26171.4 |
| tryptophan halogenase | SAMN05192549_108228 | Not Available | Negative | 4426895 - 4428433 | 56970.6 |
| tonb-dependent receptor | SAMN05192549_108229 | Not Available | Negative | 4428526 - 4431486 | 107562.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
