Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05192549_108210 | Not Available | Positive | 4408502 - 4408897 | 13582.4 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05192549_108211 | Not Available | Positive | 4408912 - 4409406 | 17098.9 |
| iron complex outermembrane recepter protein | SAMN05192549_108212 | Not Available | Positive | 4409461 - 4411920 | 86201.6 |
| acetyl esterase/lipase | SAMN05192549_108213 | Not Available | Positive | 4412005 - 4412904 | 31551.9 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05192549_108214 | Not Available | Negative | 4412921 - 4413253 | 12459.8 |
| putative auto-transporter adhesin, head gin domain | SAMN05192549_108215 | Not Available | Positive | 4413379 - 4414245 | 29057.2 |
| methyl-accepting chemotaxis protein | SAMN05192549_108216 | Not Available | Negative | 4414256 - 4415755 | 52754.7 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05192549_108217 | Not Available | Negative | 4415781 - 4418060 | 82621.8 |
| putative auto-transporter adhesin, head gin domain | SAMN05192549_108218 | Not Available | Negative | 4418151 - 4418783 | 21937.4 |
| mfs transporter, mhs family, citrate/tricarballylate:h+ symporter | SAMN05192549_108219 | Not Available | Positive | 4418953 - 4420227 | 46073.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
