Duganella sacchari

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sacchari is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and is non-spore-forming. This microbe thrives optimally at a temperature of 29.0°C, indicating its potential adaptation to mesophilic environments. As a member of the diverse microbial community, Duganella sacchari may play a significant role in various ecological niches, particularly in environments where organic matter, such as sugars, is abundant. The aerobic nature of this bacterium implies its reliance on oxygen for respiration, which may influence its distribution and interactions within microbial ecosystems. Given its morphological and physiological traits, Duganella sacchari could be involved in the degradation of organic materials, contributing to nutrient cycling in its habitat. This trait suggests that it may participate in processes such as the breakdown of plant-derived polysaccharides, which could be particularly relevant in agricultural or soil ecosystems. Understanding the specific ecological roles and interactions of Duganella sacchari remains an area for further research, particularly in the context of microbial community dynamics and its potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sacchari
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Duganella sacchari
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatrhizosphere of sugar cane
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sacchari strain Sac-22 genome assembly, contig:

Gene Summary

Adenine Count

1284171 bp

Thymine Count

1286044 bp

Guanine Count

2052384 bp

Cytosine Count

2052882 bp

Genome Length

6675676 bp

Protein-coding Genes

5864 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spore coat protein u (scpu) domain-containing proteinSAMN05192549_108150Not AvailablePositive4333874 - 433487834489.1
hypothetical proteinSAMN05192549_108151Not AvailableNegative4334886 - 433520010924.8
dna-binding transcriptional regulator, hxlr familySAMN05192549_108152Not AvailablePositive4335663 - 433616018354.2
transmembrane transcriptional regulator (anti-sigma factor rsiw)SAMN05192549_108153Not AvailableNegative4336175 - 433694527701.1
rna polymerase sigma-70 factor, ecf subfamilySAMN05192549_108154Not AvailableNegative4336942 - 433744218695.8
predicted lipoprotein with conserved yx(fwy)xxd motifSAMN05192549_108155Not AvailableNegative4337445 - 433779812434.8
diguanylate cyclase (ggdef) domain-containing proteinSAMN05192549_108156Not AvailablePositive4338123 - 4340960103117.0
dna-3-methyladenine glycosylase iSAMN05192549_108157Not AvailablePositive4340965 - 434152220826.1
trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional proteinSAMN05192549_108158Not AvailablePositive4341522 - 434319559471.6
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN05192549_108159Not AvailablePositive4343298 - 434402026668.9

Displaying genes 3861 – 3870 of 5947 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.