Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spore coat protein u (scpu) domain-containing protein | SAMN05192549_108150 | Not Available | Positive | 4333874 - 4334878 | 34489.1 |
| hypothetical protein | SAMN05192549_108151 | Not Available | Negative | 4334886 - 4335200 | 10924.8 |
| dna-binding transcriptional regulator, hxlr family | SAMN05192549_108152 | Not Available | Positive | 4335663 - 4336160 | 18354.2 |
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN05192549_108153 | Not Available | Negative | 4336175 - 4336945 | 27701.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05192549_108154 | Not Available | Negative | 4336942 - 4337442 | 18695.8 |
| predicted lipoprotein with conserved yx(fwy)xxd motif | SAMN05192549_108155 | Not Available | Negative | 4337445 - 4337798 | 12434.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05192549_108156 | Not Available | Positive | 4338123 - 4340960 | 103117.0 |
| dna-3-methyladenine glycosylase i | SAMN05192549_108157 | Not Available | Positive | 4340965 - 4341522 | 20826.1 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | SAMN05192549_108158 | Not Available | Positive | 4341522 - 4343195 | 59471.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05192549_108159 | Not Available | Positive | 4343298 - 4344020 | 26668.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
