Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN05192549_108110 | Not Available | Negative | 4293048 - 4294100 | 37742.4 |
| iron complex outermembrane recepter protein | SAMN05192549_108111 | Not Available | Positive | 4294311 - 4296548 | 79537.5 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN05192549_108112 | Not Available | Positive | 4296548 - 4297813 | 45925.5 |
| predicted dienelactone hydrolase | SAMN05192549_108113 | Not Available | Positive | 4297822 - 4299099 | 45796.1 |
| uncharacterized conserved protein yect, duf1311 family | SAMN05192549_108114 | Not Available | Negative | 4299100 - 4299474 | 13744.3 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05192549_108115 | Not Available | Positive | 4299581 - 4300315 | 27322.2 |
| predicted lipid-binding transport protein, tim44 family | SAMN05192549_108116 | Not Available | Positive | 4300333 - 4301238 | 31290.9 |
| ubiquinone biosynthesis protein ubij | SAMN05192549_108117 | Not Available | Positive | 4301317 - 4301925 | 21944.2 |
| 2-octaprenylphenol hydroxylase | SAMN05192549_108118 | Not Available | Positive | 4301925 - 4303490 | 59618.5 |
| thiopurine s-methyltransferase (tpmt) | SAMN05192549_108119 | Not Available | Positive | 4303496 - 4304092 | 21985.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
