Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system protein lpta | SAMN05192549_10890 | Not Available | Positive | 4274316 - 4274918 | 21245.2 |
| lipopolysaccharide export system atp-binding protein | SAMN05192549_10891 | Not Available | Positive | 4274920 - 4275672 | 27415.3 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN05192549_10892 | Not Available | Positive | 4275679 - 4277151 | 54549.4 |
| ssu ribosomal protein s30p | SAMN05192549_10893 | Not Available | Positive | 4277228 - 4277584 | 13473.2 |
| poly(beta-d-mannuronate) lyase | SAMN05192549_10894 | Not Available | Positive | 4277674 - 4278576 | 32386.4 |
| enoyl-coa hydratase/carnithine racemase | SAMN05192549_10895 | Not Available | Positive | 4278586 - 4279659 | 37934.5 |
| transcriptional regulator, asnc family | SAMN05192549_10896 | Not Available | Positive | 4279665 - 4280123 | 17025.8 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05192549_10897 | Not Available | Positive | 4280217 - 4280588 | 13345.6 |
| upf0042 nucleotide-binding protein | SAMN05192549_10898 | Not Available | Negative | 4280581 - 4281450 | 32151.7 |
| hpr(ser) kinase/phosphatase | SAMN05192549_10899 | Not Available | Negative | 4281577 - 4282512 | 34167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
