Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pilo | SAMN05192549_10860 | Not Available | Positive | 4237434 - 4238108 | 24649.6 |
| type iv pilus assembly protein pilp | SAMN05192549_10861 | Not Available | Positive | 4238105 - 4238641 | 19857.8 |
| type iv pilus assembly protein pilq | SAMN05192549_10862 | Not Available | Positive | 4238638 - 4240812 | 78095.3 |
| hypothetical protein | SAMN05192549_10863 | Not Available | Positive | 4240842 - 4243019 | 71926.5 |
| 3-dehydroquinate synthase | SAMN05192549_10864 | Not Available | Positive | 4243030 - 4244673 | 58683.3 |
| dgtpase | SAMN05192549_10865 | Not Available | Positive | 4244687 - 4245823 | 43326.4 |
| protein of unknown function | SAMN05192549_10866 | Not Available | Positive | 4245903 - 4246427 | 19057.8 |
| a/g-specific dna-adenine glycosylase | SAMN05192549_10867 | Not Available | Negative | 4246424 - 4247554 | 41484.9 |
| dynamin family protein | SAMN05192549_10868 | Not Available | Negative | 4247566 - 4249497 | 72494.1 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN05192549_10869 | Not Available | Negative | 4249508 - 4250341 | 30812.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
