Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c553 | SAMN05192549_10850 | Not Available | Positive | 4225340 - 4226005 | 23244.9 |
| cytochrome c biogenesis protein | SAMN05192549_10851 | Not Available | Positive | 4226118 - 4228199 | 76591.5 |
| cytochrome c-type biogenesis protein ccsb | SAMN05192549_10852 | Not Available | Positive | 4228213 - 4229376 | 43805.0 |
| sulfoxide reductase catalytic subunit yedy | SAMN05192549_10853 | Not Available | Positive | 4229447 - 4230421 | 36603.1 |
| sulfoxide reductase heme-binding subunit yedz | SAMN05192549_10854 | Not Available | Positive | 4230421 - 4231014 | 23130.3 |
| diaminopimelate decarboxylase | SAMN05192549_10855 | Not Available | Negative | 4231119 - 4232396 | 45641.7 |
| cyay protein | SAMN05192549_10856 | Not Available | Positive | 4232618 - 4232947 | 11955.8 |
| penicillin-binding protein 1a | SAMN05192549_10857 | Not Available | Negative | 4232993 - 4235353 | 86416.1 |
| type iv pilus assembly protein pilm | SAMN05192549_10858 | Not Available | Positive | 4235684 - 4236760 | 38598.4 |
| type iv pilus assembly protein piln | SAMN05192549_10859 | Not Available | Positive | 4236760 - 4237422 | 23948.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
