Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial translation initiation factor 1 (bif-1) | SAMN05192549_10829 | Not Available | Positive | 4202366 - 4202584 | 8239.22 |
| lsu ribosomal protein l36p | SAMN05192549_10830 | Not Available | Positive | 4202619 - 4202732 | 4332.61 |
| small subunit ribosomal protein s13 | SAMN05192549_10832 | Not Available | Positive | 4202760 - 4203125 | 13664.9 |
| ssu ribosomal protein s11p | SAMN05192549_10833 | Not Available | Positive | 4203140 - 4203544 | 14132.1 |
| small subunit ribosomal protein s4 | SAMN05192549_10834 | Not Available | Positive | 4203739 - 4204362 | 23254.1 |
| dna-directed rna polymerase subunit alpha | SAMN05192549_10835 | Not Available | Positive | 4204473 - 4205450 | 35632.1 |
| large subunit ribosomal protein l17 | SAMN05192549_10836 | Not Available | Positive | 4205568 - 4205963 | 14916.4 |
| outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid | SAMN05192549_10837 | Not Available | Positive | 4206097 - 4208283 | 79003.1 |
| uncharacterized iron-regulated membrane protein | SAMN05192549_10838 | Not Available | Positive | 4208334 - 4209575 | 46415.2 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN05192549_10839 | Not Available | Negative | 4209625 - 4211295 | 60916.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
