Duganella sacchari

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sacchari is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and is non-spore-forming. This microbe thrives optimally at a temperature of 29.0°C, indicating its potential adaptation to mesophilic environments. As a member of the diverse microbial community, Duganella sacchari may play a significant role in various ecological niches, particularly in environments where organic matter, such as sugars, is abundant. The aerobic nature of this bacterium implies its reliance on oxygen for respiration, which may influence its distribution and interactions within microbial ecosystems. Given its morphological and physiological traits, Duganella sacchari could be involved in the degradation of organic materials, contributing to nutrient cycling in its habitat. This trait suggests that it may participate in processes such as the breakdown of plant-derived polysaccharides, which could be particularly relevant in agricultural or soil ecosystems. Understanding the specific ecological roles and interactions of Duganella sacchari remains an area for further research, particularly in the context of microbial community dynamics and its potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sacchari
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Duganella sacchari
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatrhizosphere of sugar cane
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sacchari strain Sac-22 genome assembly, contig:

Gene Summary

Adenine Count

1284171 bp

Thymine Count

1286044 bp

Guanine Count

2052384 bp

Cytosine Count

2052882 bp

Genome Length

6675676 bp

Protein-coding Genes

5864 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidyl-trna synthetaseSAMN05192549_101331Not AvailableNegative337306 - 33864949848.1
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseSAMN05192549_101332Not AvailableNegative338642 - 33990145613.9
cytoskeleton protein rodzSAMN05192549_101333Not AvailableNegative339918 - 34091633751.4
type iv pilus assembly protein pilfSAMN05192549_101334Not AvailableNegative340930 - 34175129659.2
23s rrna m(2)a-2503 methyltransferaseSAMN05192549_101335Not AvailableNegative341751 - 34292343301.2
nucleoside diphosphate kinaseSAMN05192549_101336Not AvailableNegative342996 - 34340314697.7
modulator of ftsh proteaseSAMN05192549_101337Not AvailablePositive343666 - 34434624211.2
penicillin-binding protein 1cSAMN05192549_101338Not AvailableNegative344391 - 34648775333.6
hypothetical proteinSAMN05192549_101339Not AvailableNegative346484 - 352144204638.0
23s rrna m(5)u-1939 methyltransferaseSAMN05192549_101340Not AvailableNegative352225 - 35356850147.8

Displaying genes 341 – 350 of 5947 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.