Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05192549_10564 | Not Available | Negative | 2757760 - 2757996 | 8363.38 |
| protein of unknown function | SAMN05192549_10565 | Not Available | Negative | 2758019 - 2758405 | 13007.4 |
| antitoxin component ywqk of the ywqjk toxin-antitoxin module | SAMN05192549_10566 | Not Available | Negative | 2758405 - 2759112 | 26092.0 |
| type vi secretion system secreted protein vgrg | SAMN05192549_10567 | Not Available | Negative | 2759132 - 2761123 | 71709.5 |
| type vi secretion system protein vasg | SAMN05192549_10568 | Not Available | Negative | 2761120 - 2763810 | 98093.4 |
| type vi secretion system protein imph | SAMN05192549_10569 | Not Available | Negative | 2763816 - 2764832 | 36351.1 |
| type vi secretion system protein impg | SAMN05192549_10570 | Not Available | Negative | 2764820 - 2766568 | 64462.5 |
| type vi secretion system lysozyme-like protein | SAMN05192549_10571 | Not Available | Negative | 2766565 - 2767020 | 16239.6 |
| type vi secretion system secreted protein hcp | SAMN05192549_10572 | Not Available | Negative | 2767079 - 2767564 | 17481.7 |
| type vi secretion system protein impc | SAMN05192549_10573 | Not Available | Negative | 2767647 - 2769137 | 54697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
