Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase (glutamine-hydrolysing) | SAMN05192549_104500 | Not Available | Positive | 2651707 - 2653317 | 59160.3 |
| phage integrase family protein | SAMN05192549_104501 | Not Available | Positive | 2653875 - 2654747 | 33282.6 |
| rhs repeat-associated core domain-containing protein | SAMN05192549_104502 | Not Available | Positive | 2654696 - 2656669 | 71956.3 |
| predicted abc-type atpase | SAMN05192549_104503 | Not Available | Negative | 2658282 - 2659238 | 35476.1 |
| hypothetical protein | SAMN05192549_104504 | Not Available | Negative | 2659275 - 2659514 | 8737.49 |
| rhs repeat-associated core domain-containing protein | SAMN05192549_104505 | Not Available | Positive | 2660295 - 2661761 | 54107.6 |
| filamentous hemagglutinin | SAMN05192549_104506 | Not Available | Positive | 2662184 - 2662330 | 5709.92 |
| hypothetical protein | SAMN05192549_104507 | Not Available | Negative | 2662510 - 2662731 | 8884.01 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05192549_104508 | Not Available | Positive | 2663634 - 2664428 | 29091.8 |
| pepsy-associated tm region | SAMN05192549_104509 | Not Available | Negative | 2665187 - 2666635 | 54202.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
