Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | SAMN05192549_104470 | Not Available | Positive | 2620349 - 2621530 | 43317.0 |
| rnase hii | SAMN05192549_104471 | Not Available | Positive | 2621527 - 2622147 | 22325.1 |
| rna methyltransferase, trmh family | SAMN05192549_104472 | Not Available | Positive | 2622144 - 2622929 | 27970.7 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05192549_104473 | Not Available | Positive | 2622948 - 2624147 | 43943.2 |
| catalase | SAMN05192549_104474 | Not Available | Positive | 2624232 - 2626454 | 80936.4 |
| imidazolonepropionase | SAMN05192549_104475 | Not Available | Negative | 2626462 - 2627805 | 48419.0 |
| hypothetical protein | SAMN05192549_104476 | Not Available | Negative | 2627805 - 2628653 | 32067.2 |
| phosphoenolpyruvate synthase | SAMN05192549_104477 | Not Available | Positive | 2628729 - 2631236 | 90949.6 |
| membrane protein implicated in regulation of membrane protease activity | SAMN05192549_104478 | Not Available | Positive | 2631395 - 2631817 | 14840.0 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05192549_104479 | Not Available | Positive | 2631839 - 2632774 | 34056.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
