Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease, protease subunit | SAMN05192549_104430 | Not Available | Positive | 2577021 - 2577581 | 20494.2 |
| hypothetical protein | SAMN05192549_104431 | Not Available | Negative | 2577630 - 2577836 | 6786.33 |
| protein of unknown function | SAMN05192549_104432 | Not Available | Positive | 2578092 - 2580449 | 84834.3 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05192549_104433 | Not Available | Negative | 2580469 - 2581095 | 21986.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05192549_104434 | Not Available | Positive | 2581192 - 2582079 | 32350.5 |
| glutathione s-transferase | SAMN05192549_104435 | Not Available | Negative | 2582080 - 2582724 | 23753.6 |
| pap2 superfamily protein | SAMN05192549_104436 | Not Available | Positive | 2582818 - 2583456 | 23074.6 |
| condensin subunit smc | SAMN05192549_104437 | Not Available | Positive | 2583548 - 2587075 | 132046.0 |
| zipa, c-terminal ftsz-binding domain | SAMN05192549_104438 | Not Available | Positive | 2587072 - 2588220 | 40250.5 |
| dna ligase (nad+) | SAMN05192549_104439 | Not Available | Positive | 2588230 - 2590566 | 85126.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
